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Troubleshooting Slow Website Loading


I have a VPS over at futurehosting, and I'm having some issues with my PHP/MySQL sites loading slowly after a few days of uptime. A restart of the various services (apache/mysql) fixes the issue, but I'd like the issue to not start in the first place.

I know very little of server administration (I'm still learning) so just let me know what info you need to see to do the troubleshooting and I'll get it to you.


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I lunch a filesharing website below this server configuration:

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# CentOS (64bit) OS

# 2 x 1000Mbps Full-Duplex Uplink Port

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# 4 IP

250 Mbps Unmetered bandwidth Volume Connectivity

But most the time it load too slow.

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System Linux host.alqema.com 2.6.9-023stab044.4-enterprise #1 SMP Thu May 24 17:41:23 MSD 2007 i686 Build Date Sep 26 2006 17:52:35 Configure Command './configure' '--with-apxs=/usr/local/apache/bin/apxs' '--prefix=/usr/local' '--with-xml' '--enable-bcmath' '--enable-calendar' '--with-curl' '--enable-exif' '--enable-ftp' '--with-gd' '--with-jpeg-dir=/usr/local' '--with-png-dir=/usr' '--with-xpm-dir=/usr/X11R6' '--with-gettext' '--with-mcrypt' '--with-mhash' '--enable-magic-quotes' '--with-mysqli' '--with-mysql=/usr' '--with-openssl' '--enable-discard-path' '--with-pear' '--with-pspell' '--enable-sockets' '--enable-track-vars' '--with-ttf' '--with-freetype-dir=/usr' '--enable-gd-native-ttf' '--with-zlib' Server API Apache Virtual Directory Support disabled Configuration File (php.ini) Path /usr/local/Zend/etc/php.ini PHP API 20020918 PHP Extension 20020429 Zend Extension 20050606 Debug Build no Zend Memory Manager enabled Thread Safety disabled Registered PHP Streams php, http, ftp, https, ftps, compress.zlib

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Kernel Version:
2.6.18-8.1.14.el5
Hardware:
Motherboard SuperMicro X7DBR-E Intel Xeon DualCore DualProc SATA 2Proc

Processor Intel Xeon-Clovertown 5335-QuadCore-LV 2GHz

RAM slot 1 Generic 1GB 667ECC FB-DIMM DDR2 1GB
RAM slot 2 Generic 1GB 667ECC FB-DIMM DDR2 1GB
RAM slot 3 Generic 1GB 667ECC FB-DIMM DDR2 1GB
RAM slot 4 Generic 1GB 667ECC FB-DIMM DDR2 1GB
RAM slot 5 Empty
RAM slot 6 Empty
RAM slot 7 Empty
RAM slot 8 Empty

Drive Controller Mainboard Onboard SATAII Controller

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Tasks: 154 total, 1 running, 153 sleeping, 0 stopped, 0 zombie
Cpu0 : 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Cpu1 : 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Cpu2 : 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Cpu3 : 0.3%us, 0.0%sy, 0.0%ni, 99.7%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Mem: 3369376k total, 2478128k used, 891248k free, 228052k buffers
Swap: 2096440k total, 0k used, 2096440k free, 1964784k cached

Vmstat:
procs -----------memory---------- ---swap-- -----io---- --system-- -----cpu------
r b swpd free buff cache si so bi bo in cs us sy id wa st
0 0 0 891124 228272 1964832 0 0 34 21 99 81 1 0 98 0 0
0 0 0 891124 228284 1964824 0 0 0 9 1045 161 0 0 100 0 0
1 0 0 891124 228292 1964832 0 0 0 3 1031 130 0 0 100 0 0
0 0 0 891124 228300 1964832 0 0 0 3 1045 157 0 0 100 0 0
0 0 0 891000 228308 1964832 0 0 0 7 1035 144 0 0 100 0 0

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Apache:
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php:
PHP 5.2.4 (cli) (built: Oct 17 2007 15:00:59)
Copyright (c) 1997-2007 The PHP Group
Zend Engine v2.2.0, Copyright (c) 1998-2007 Zend Technologies

things from the tutorials section ive tried:
this website/showthread.php?t=549666
this website/showthread.php?t=579135
this website/showthread.php?t=340239 (only did 4. Tuning sysctl.conf from here)


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116.49.xx.xx - - [15/Jun/2008:18:16:30 +0800] "GET /?fromuid=448?info_hash=%A0%AF%9E%0C%9C%A9%0D%29k%A4%21%AF2%AC%DD%5C%5E%CB%DF%17&peer_id=%2DXL0012%2D%E8%ACfS%94%9E%81%8E%FF%D9%F2%1D&ip=169.254.xx.xx& port=80&uploaded=2348474988&downloaded=2348474988&left=2094006272&numwant=200&key=6830&compact=1 HTTP/1.0" 200 453 "-" "Bittorrent"
116.49.xx.xx - - [15/Jun/2008:18:16:30 +0800] "GET /?fromuid=23?info_hash=%A0%AF%9E%0C%9C%A9%0D%29k%A4%21%AF2%AC%DD%5C%5E%CB%DF%17&peer_id=%2DXL0012%2D%E8%ACfS%94%9E%81%8E%FF%D9%F2%1D&ip=169.254.xx.xx&p ort=80&uploaded=2348474988&downloaded=2348474988&left=2094006272&numwant=200&key=20271&compact=1 HTTP/1.0" 200 453 "-" "Bittorrent"
116.49.xx.xx - - [15/Jun/2008:18:16:31 +0800] "GET /?fromuid=168?info_hash=%A0%AF%9E%0C%9C%A9%0D%29k%A4%21%AF2%AC%DD%5C%5E%CB%DF%17&peer_id=%2DXL0012%2D%E8%ACfS%94%9E%81%8E%FF%D9%F2%1D&ip=169.254.xx.xx& port=80&uploaded=2348474988&downloaded=2348474988&left=2094006272&numwant=200&key=8883&compact=1 HTTP/1.0" 200 453 "-" "Bittorrent"
116.49.xx.xx - - [15/Jun/2008:18:16:31 +0800] "GET /?fromuid=221?info_hash=%A0%AF%9E%0C%9C%A9%0D%29k%A4%21%AF2%AC%DD%5C%5E%CB%DF%17&peer_id=%2DXL0012%2D%E8%ACfS%94%9E%81%8E%FF%D9%F2%1D&ip=169.254.xx.xx& port=80&uploaded=2348474988&downloaded=2348474988&left=2094006272&numwant=200&key=12323&compact=1 HTTP/1.0" 200 453 "-" "Bittorrent"
116.49.xx.xx - - [15/Jun/2008:18:16:31 +0800] "GET /?fromuid=32?info_hash=%A0%AF%9E%0C%9C%A9%0D%29k%A4%21%AF2%AC%DD%5C%5E%CB%DF%17&peer_id=%2DXL0012%2D%E8%ACfS%94%9E%81%8E%FF%D9%F2%1D&ip=169.254.xx.xx&p ort=80&uploaded=2348474988&downloaded=2348474988&left=2094006272&numwant=200&key=14310&compact=1 HTTP/1.0" 200 453 "-" "Bittorrent"

when i suspend this user account, it fix the problem....

but when i reupload a new forum file (no mods, original version but keep the old data, ex. post, pm)

to recover the old forum file and then reactive the account again,

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Any suggestion?

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