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Websites Infected With Trojan How To Solve?


i see my websites are infected with some trojan.

there are some iframe tag simlilar to this in all index files

<iframe src="http://traff<<removed>>.cn/in.cgi?27" width=100 height=80></iframe>
any idea how might this iframe inserted in my codes.

i have tried to format my systems and remove all saved ftp passwords , but still this virus is comming back and the strange thing is i have website on different servers infected with same virus
any idea how this is happened and how to avoide this?


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how many websites can stand on VPS with following configurations?

I'm asking this because Can I install whm reselling script like whmphp? or WHM Reseller creator?

It enables to create master reseller and whm reseller respectively. So there will be huge number of websites, databases, emails hosted on VPS
So which one to choose?

1.
Disk space - 10 GB
Bandwidth - 200 GB
Burst. RAM - 256 MB
Gurnt. RAM - 128 MB
Max CPU Usage (per CPU) - 80 %
OS - CentOS 5.3

2.
Disk space - 20 GB
Bandwidth - 400 GB
Burst. RAM - 512 MB
Gurnt. RAM - 256 MB
Max CPU Usage (per CPU) -
OS - CentOS 5.3

3.
Disk space - 30 GB
Bandwidth - 800 GB
Burst. RAM - 1024 MB
Gurnt. RAM - 512 MB
Max CPU Usage (per CPU) -
OS - CentOS 5.3

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[mysqld]
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#old_passwords
back_log = 50
skip-innodb
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key_buffer_size = 144M
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quick
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